25727 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25727 chr_22 HA 449352 451902 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7442833 Thaps25727.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Most Highly Correlated Transcripts

38258

ATM1
0.9063

36007

Aldolase_II superfamily
0.8869

267979

HCO3_cotransp superfamily
0.8809

2116

DUF1336 superfamily
0.8749

263961

(Tp_Myb1R1) MYB DNA binding protein/ transcription factor-like protein
0.8728

264002

guanyl nucleotide exchange factor
0.871

261516

ArfGap
0.8704

260856

NBD_sugar-kinase_HSP70_actin superfamily
0.8668

1676

hypothetical protein
0.8605

264699

ATS1
0.8589

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.97E-11 309 - 371 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 60.3969 2.97E-11 309 - 371 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004308 -

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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