25730 Rdx superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25730	chr_22	Rdx superfamily	492358	493681	+	Rdx superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442839	Thaps25730.1, Thaps25730.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0259	0.35	0.0037 7800

Most Highly Correlated Transcripts

4372 hypothetical protein 0.8944	262965 0.8829	5806 TIM_phosphate_binding superfamily 0.8825	269028 Methyltrans_RNA superfamily 0.8802	31627 RluA 0.8681	38472 HA2 0.8646
9598 hypothetical protein 0.8637	25473 SpoU_methylase 0.8629	30454 Brix 0.8574	269034 hypothetical protein 0.8555

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rdx superfamily		Rdx family; This entry is an approximately 100 residue region of selenoprotein-T, conserved from...	-	108.417	8.54E-29	80 - 195	superfamily	260924

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_34957	PHATRDRAFT_34957	Not available	Not available	460560	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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