260757 Fer4_NifH superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
260757	chr_1	Fer4_NifH superfamily	183318	184060	+	Fer4_NifH superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445249	Thaps260757.1, Thaps260757.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0017

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0149	0.40	0.00066 1.8

Most Highly Correlated Transcripts

28125 PLN00203 0.8624	268908 Trans_IPPS_HH 0.8341	268592 VDE superfamily 0.8314	37288 PLN02487 0.8269	33663 PLN02649 0.8238	7304 hypothetical protein 0.8215
6759 hypothetical protein 0.8207	574 PRK05444 0.8141	36669 TPT 0.8084	16295 FBPase 0.8071

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fer4_NifH superfamily		The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain....	-	92.1807	1.11E-22	46 - 232	superfamily	266552

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_19762	PHATRDRAFT_19762	273529	170126	Not available	Cre06.g277200.t1.2	Not available	258968

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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