261258 (ZFP7) PHD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261258 chr_2 (ZFP7) PHD 454285 455033 - PHD

Synonyms

NCBI ID Ensembl Genomes exon ID
7448656 Thaps261258.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0147
 0.38

Most Highly Correlated Transcripts

260975

(nhe3) Na_H_Exchanger
0.8944

268475

C2 superfamily
0.8843

10873

NA
0.8803

261660

GH18_chitinase-like superfamily
0.8801

36563

MYSc
0.8794

32217

MA3
0.8749

35129

(Tp_Myb2R9) PLN03142
0.8731

264679

Syja_N
0.8659

168

(RPB1) PRK08566
0.8642

261472

WD40 superfamily
0.8639

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PHD PHD zinc finger; The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in... cl17445 56.0662 5.07E-11 87 - 131 specific 214584
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 56.0662 5.07E-11 87 - 131 superfamily 266687

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 183808 206266 Not available Not available AT4G22140.2 471105

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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