261203 PRK05550
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261203 chr_2 PRK05550 169685 171373 - PRK05550

Synonyms

NCBI ID Ensembl Genomes exon ID
7442193 Thaps261203.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0064
 0.41

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9357

bd624

(bd624) Glyco_transf_34 superfamily
0.9014

bd446

(bd446) HrpA
0.887

1773

hypothetical protein
0.8745

23111

PqqL
0.8727

9490

hypothetical protein
0.8693

8380

hypothetical protein
0.8665

4192

hypothetical protein
0.8658

24725

SEC14
0.8653

6243

Macro superfamily
0.8651

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PMSR superfamily Peptide methionine sulfoxide reductase; This enzyme repairs damaged proteins. Methionine sulfoxide... - 142.363 1.15E-39 403 - 555 superfamily 260385
SelR superfamily SelR domain; Methionine sulfoxide reduction is an important process, by which cells regulate... - 71.4029 1.24E-14 227 - 360 superfamily 265802
PRK05550 bifunctional methionine sulfoxide reductase B/A protein; Provisional - 173.93 1.44E-49 227 - 555 multi-dom 235499

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 257340 110664 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006464 GO:0008113 -

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0008113

peptide-methionine (S)-S-oxide reductase activity

Details: 
Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.
GO Category: 
MF

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