261392 NPR2 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261392	chr_2	NPR2 superfamily	1129182	1131872	+	NPR2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444656	Thaps261392.5, Thaps261392.2, Thaps261392.1, Thaps261392.3, Thaps261392.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0448

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0248	0.34	3800 40000

Most Highly Correlated Transcripts

262439 Bromodomain superfamily 0.9078	262797 Sec7 0.9068	9103 hypothetical protein 0.9015	263610 COG3899 0.8909	bd392 (bd392) DEXDc 0.89	38363 MYSc 0.8892
3719 DECH_helic 0.8889	4312 hypothetical protein 0.8887	9860 hypothetical protein 0.8841	3139 hypothetical protein 0.883

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NPR2 superfamily		Nitrogen permease regulator 2; This family of regulators are involved in post-translational control...	-	189.068	1.92E-53	157 - 495	superfamily	253622

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43499	PHATRDRAFT_43499	149437	256036	Not available	Not available	Not available	350366

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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