261754 SUL1Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261754	chr_3	SUL1	811550	814375	+	SUL1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444749	Thaps261754.1, Thaps261754.2, Thaps261754.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0449

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0113	0.35	50 470

Most Highly Correlated Transcripts

261357 NAD_binding_8 superfamily 0.9035	263610 COG3899 0.8962	263051 ZntA 0.8661	10006 UCH 0.854	1681 Telomere_reg-2 superfamily 0.8531	31193 Indigoidine_A 0.8531
33092 RINGv superfamily 0.8486	261392 NPR2 superfamily 0.8451	10588 hypothetical protein 0.8443	6629 hypothetical protein 0.844

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sulfate_transp superfamily		Sulfate transporter family; Mutations in human SLC26A2 lead to several human diseases.	-	106.153	4.55E-25	224 - 486	superfamily	267603
SUL1		Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	-	166.683	1.02E-43	129 - 649	multi-dom	223732

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	189840	238019	113911	Not available	Not available	507890

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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