261857 DHFR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261857 chr_3 DHFR 1420570 1421269 - DHFR

Synonyms

NCBI ID Ensembl Genomes exon ID
7451283 Thaps261857.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0467

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0046
 0.42

Most Highly Correlated Transcripts

6075

hypothetical protein
0.8325

262616

(MYB22)
0.8293

263599

COG3899
0.8235

264271

PKc_like superfamily
0.8175

263610

COG3899
0.8138

36490

(APS2) APS2
0.8135

21613

hypothetical protein
0.8094

7725

hypothetical protein
0.8048

260939

DSPc
0.802

bd945

(bd945) COG3899
0.7994

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DHFR Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as... cl17426 107.609 5.47E-29 39 - 211 specific 238127
DHFR superfamily Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as... - 107.609 5.47E-29 39 - 211 superfamily 266674

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 241673 244892 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004146 GO:0006545 GO:0009165 -

GO:0004146

dihydrofolate reductase activity

Details: 
Catalysis of the reaction: 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+.
GO Category: 
MF

GO:0006545

glycine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of glycine, aminoethanoic acid.
GO Category: 
BP

GO:0009165

nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).
GO Category: 
BP

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