263181 cpn10
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263181 chr_7 cpn10 935785 936704 + cpn10

Synonyms

NCBI ID Ensembl Genomes exon ID
7449248 Thaps263181.2, Thaps263181.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0090
 0.39

Most Highly Correlated Transcripts

24832

hypothetical protein
0.9022

270222

0.899

21419

hypothetical protein
0.8902

ThpsCp134

(rpl34) ribosomal protein L34
0.8704

4138

hypothetical protein
0.8626

270253

(NTT8) hypothetical protein
0.8556

37277

tig
0.8529

268398

PRK04173
0.8514

261684

(LEUS) PLN02563
0.8485

23462

hypothetical protein
0.841

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an... cl09113 84.8663 5.73E-21 64 - 154 specific 238197
cpn10 superfamily Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an... - 84.8663 5.73E-21 64 - 154 superfamily 263722
cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an... cl09113 84.8663 5.73E-21 64 - 154 specific 238197
cpn10 superfamily Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an... - 84.8663 5.73E-21 64 - 154 superfamily 263722

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16537 PHATRDRAFT_16537 270199 313400 437005 Cre08.g358562.t1.1 AT5G20720.3 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006457 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

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