26398 Peptidase_C12_UCH37_BAP1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26398 chr_12 Peptidase_C12_UCH37_BAP1 905963 907085 - Peptidase_C12_UCH37_BAP1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448016 Thaps26398.1, Thaps26398.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0437

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

23050

hypothetical protein
0.86

35728

FtsZ_type1
0.849

10558

HAD-SF-IIA-hyp4
0.8469

262925

FAA1
0.8452

10025

WD40 superfamily
0.8429

37118

FeThRed_B
0.8409

11068

(PSA6) proteasome_alpha_type_6
0.8359

30683

proteasome_alpha_type_2
0.8352

23806

Nuc_sug_transp
0.832

9247

hypothetical protein
0.8287

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C12_UCH37_BAP1 Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-... cl08306 286.829 6.29E-96 8 - 251 specific 187738
Peptidase_C12 superfamily Cysteine peptidase C12 contains ubiquitin carboxyl-terminal hydrolase (UCH) families L1, L3, L5 and... - 286.829 6.29E-96 8 - 251 superfamily 263579

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3924 PHATRDRAFT_3924 167799 191173 444614 Cre06.g253300.t1.2 AT1G65650.1 514191

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004221 GO:0005622 GO:0006511 -

GO:0004221

ubiquitin thiolesterase activity

Details: 
Catalysis of the reaction: ubiquitin C-terminal thioester + H2O = ubiquitin + a thiol.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0006511

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

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