264065 (cobA) PLN02625
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264065 chr_13 (cobA) PLN02625 897255 898352 - PLN02625

Synonyms

NCBI ID Ensembl Genomes exon ID
7450516 Thaps264065.1, Thaps264065.4, Thaps264065.3, Thaps264065.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0295

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9037

13308

PLN02948
0.8935

261719

AdoMet_MTases superfamily
0.8919

5692

Peptidase_C15 superfamily
0.8856

6642

hypothetical protein
0.8784

9017

hypothetical protein
0.8756

5806

TIM_phosphate_binding superfamily
0.873

38509

YihA_EngB
0.8705

24619

2-Hacid_dh_1
0.8701

19158

GRX_PICOT_like
0.8689

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02625 uroporphyrin-III C-methyltransferase cl00304 267.653 4.60E-88 93 - 333 specific 178232
TP_methylase superfamily S-AdoMet dependent tetrapyrrole methylases; This family uses S-AdoMet (S-adenosyl-L-methionine or... - 267.653 4.60E-88 93 - 333 superfamily 260339

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre12.g538650.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0008168 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008168

methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to an acceptor molecule.
GO Category: 
MF

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