264293 DegQ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264293 chr_15 DegQ 358906 360411 - DegQ

Synonyms

NCBI ID Ensembl Genomes exon ID
7441994 Thaps264293.2, Thaps264293.4, Thaps264293.3, Thaps264293.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

bd687

(bd687) NA
0.864

7683

DUF3395 superfamily
0.8625

12899

AAA
0.862

5079

TRM13 superfamily
0.8477

262521

WD40 superfamily
0.8449

bd1662

(bd1662) TIGR00367
0.8409

21149

hypothetical protein
0.8404

39741

(APM3) AP-3_Mu3_Cterm
0.8394

6648

hypothetical protein
0.8371

bd393

(bd393) nst superfamily
0.8334

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [... - 85.7174 7.16E-19 12 - 207 multi-dom 223343

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004252 GO:0006508 -

GO:0004252

serine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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