264296 HP_PGM_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264296 chr_15 HP_PGM_like 386292 387305 + HP_PGM_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7442000 Thaps264296.2, Thaps264296.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0364

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

bd923

(bd923) NA
0.8569

2240

hypothetical protein
0.8233

7299

hypothetical protein
0.8166

32503

LETM1 superfamily
0.813

5671

hypothetical protein
0.8074

262797

Sec7
0.8044

8777

SPX
0.8027

4708

hypothetical protein
0.8022

bd686

(bd686) Glyco_transf_22 superfamily
0.802

261357

NAD_binding_8 superfamily
0.7959

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly... cl11399 86.9924 5.75E-21 79 - 165 specific 132718
HP superfamily Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases;... - 86.9924 5.75E-21 79 - 165 superfamily 264352

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 270917 6771 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

Add comment

Log in to post comments