268196 PHD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268196 chr_2 PHD 452588 453916 - PHD

Synonyms

NCBI ID Ensembl Genomes exon ID
7448655 Thaps268196.4, Thaps268196.1, Thaps268196.3, Thaps268196.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0333

Most Highly Correlated Transcripts

269496

(Tp_TAZ3_PHD1) KAT11 superfamily
0.908

20666

RabGAP-TBC
0.8979

10753

hypothetical protein
0.8845

1551

hypothetical protein
0.8749

21568

hypothetical protein
0.8613

22442

CHD
0.8589

268872

SET
0.8582

269896

hypothetical protein
0.8576

24655

hypothetical protein
0.8562

21307

hypothetical protein
0.8556

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PHD PHD zinc finger; The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in... cl17445 64.1553 1.14E-13 67 - 111 specific 214584
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 64.1553 1.14E-13 67 - 111 superfamily 266687

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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