268262 ALDH_F5_SSADH_GabD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268262 chr_2 ALDH_F5_SSADH_GabD 980470 983564 - ALDH_F5_SSADH_GabD

Synonyms

NCBI ID Ensembl Genomes exon ID
7444628 Thaps268262.1, Thaps268262.2, Thaps268262.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0119

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0036
 0.41

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9743

270222

0.756

bd1449

(bd1449) SpoT
0.7032

263917

0.6799

bd1855

(bd1855) NA
0.6729

bd1810

(bd1810) FAD_binding_4
0.6715

262692

0.6571

36078

PRX5_like
0.6526

16075

tpt
0.651

17214

PLN02512
0.6466

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like;... cl11961 692.636 0 1 - 449 specific 143421
ALDH-SF superfamily NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-... - 692.636 0 1 - 449 superfamily 264488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28191 PHATRDRAFT_28191 275063 240136 443869 Cre08.g381702.t1.1 AT1G79440.1 489802

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0004777 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004777

succinate-semialdehyde dehydrogenase (NAD+) activity

Details: 
Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+.
GO Category: 
MF

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