269232 EFh
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269232 chr_7 EFh 727191 728946 - EFh

Synonyms

NCBI ID Ensembl Genomes exon ID
7452280 Thaps269232.3, Thaps269232.1, Thaps269232.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0173

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0202
 0.30

Most Highly Correlated Transcripts

23516

hypothetical protein
0.9097

24754

hypothetical protein
0.9094

23958

Aldose_epim superfamily
0.9079

31829

CBS_like
0.8993

264177

P4Hc
0.897

268610

EMP70 superfamily
0.8958

261400

NA
0.8932

37934

GRX_PICOT_like
0.8926

269624

TIM_phosphate_binding superfamily
0.8913

36037

Trypsin_2
0.8859

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 63.7209 6.86E-13 178 - 235 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 63.7209 6.86E-13 178 - 235 superfamily 238008

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31322 PHATRDRAFT_31322 261156 250123 Not available Not available AT1G53210.1 349569

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 GO:0016021 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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