269248 (AAT1_2) Aminotran_1_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269248 chr_7 (AAT1_2) Aminotran_1_2 1046243 1048030 - Aminotran_1_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7447056 Thaps269248.1, Thaps269248.2, Thaps269248.4, Thaps269248.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0455

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

19158

GRX_PICOT_like
0.9032

261823

FIG superfamily
0.8985

4524

DHQS
0.8814

268443

SAICAR_synt_Sc
0.8774

267979

HCO3_cotransp superfamily
0.8633

38707

Aldolase_Class_I superfamily
0.8613

41655

Chloroa_b-bind
0.8598

13393

PLN02321
0.8597

30701

PRK05279
0.8595

269624

TIM_phosphate_binding superfamily
0.8586

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 172.141 6.84E-49 95 - 460 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 172.141 6.84E-49 95 - 460 superfamily 267298
Aminotran_1_2 Aminotransferase class I and II; Aminotransferase class I and II. - 283.814 2.46E-91 92 - 458 multi-dom 249636

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23871 PHATRDRAFT_23871 266538 320333 Not available Cre06.g257950.t1.2 AT2G30970.2 284595

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0006520 GO:0008483 GO:0003824 GO:0009058 GO:0016769 GO:0004069 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0008483

transaminase activity

Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0004069

L-aspartate:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate.
GO Category: 
MF

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