2772 Utp14
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2772 chr_2 Utp14 1810420 1813372 - Utp14

Synonyms

NCBI ID Ensembl Genomes exon ID
7452454 Thaps2772.4, Thaps2772.3, Thaps2772.2, Thaps2772.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0166
 0.18

Most Highly Correlated Transcripts

36434

DUF1253
0.9531

20985

COG5593
0.9447

33425

BMS1
0.9417

32374

TPR
0.937

22212

COG5638
0.9357

29018

NMD3
0.9339

24849

(Tp_CCCH8) DnaQ_like_exo superfamily
0.9339

21082

Cupin_8 superfamily
0.9338

42599

SrmB
0.9293

37965

S1_like superfamily
0.9292

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Utp14 Utp14 protein; This protein is found to be part of a large ribonucleoprotein complex containing the... - 320.089 5.66E-96 84 - 911 multi-dom 252705

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50246 PHATRDRAFT_50246 Not available 328766 103612 Not available AT5G08600.1 553738

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003910 -

GO:0003910

DNA ligase (ATP) activity

Details: 
Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m).
GO Category: 
MF

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