29008 thrA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29008 chr_7 thrA 1573189 1576364 - thrA

Synonyms

NCBI ID Ensembl Genomes exon ID
7450716 Thaps29008.2, Thaps29008.4, Thaps29008.1, Thaps29008.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0291

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

269371

hypothetical protein
0.861

33008

PLN02338
0.84

24601

CbiX_SirB_N
0.8218

31810

pyruv_kin
0.8203

23655

hypothetical protein
0.8199

bd258

(bd258) HU
0.8164

264164

Porin3_Tom40
0.8154

20637

SNc
0.7986

270365

hypothetical protein
0.7948

21258

DUF3523
0.7928

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ACT_AKi-HSDH-ThrA-like_1 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH); This... cl09141 83.8003 4.47E-19 415 - 494 specific 153193
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 88.1789 9.95E-21 497 - 560 superfamily 263730
AAK superfamily Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-... - 291.381 1.71E-90 90 - 378 superfamily 260430
Homoserine_dh superfamily Homoserine dehydrogenase; Homoserine dehydrogenase. - 148.366 1.39E-40 720 - 925 superfamily 250099
Homoserine_dh superfamily Homoserine dehydrogenase; Homoserine dehydrogenase. - 148.366 1.39E-40 720 - 925 superfamily 250099
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 88.1789 9.95E-21 497 - 560 superfamily 263730
NAD_binding_3 superfamily Homoserine dehydrogenase, NAD binding domain; This domain adopts a Rossmann NAD binding fold. The C... - 63.1232 1.10E-11 574 - 712 superfamily 251960
thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional - 746.596 0 90 - 928 multi-dom 181856

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22113 PHATRDRAFT_22113 233939 246786 456186 Cre18.g749447.t1.1 AT4G19710.2 347295

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008652 GO:0004072 GO:0004412 GO:0008152 GO:0016597 -

GO:0008652

cellular amino acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
GO Category: 
BP

GO:0004072

aspartate kinase activity

Details: 
Catalysis of the reaction: L-aspartate + ATP = 4-phospho-L-aspartate + ADP + H(+).
GO Category: 
MF

GO:0004412

homoserine dehydrogenase activity

Details: 
Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016597

amino acid binding

Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
GO Category: 
MF

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