3013 (ubc) UBCc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
3013 chr_2 (ubc) UBCc 2524484 2525117 + UBCc
NCBI ID Ensembl Genomes exon ID
7452943 Thaps3013.1, Thaps3013.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0055
hypothetical protein
0.9124
TRX_reduct
0.8646
0.858
TIM_phosphate_binding superfamily
0.8539
NA
0.8484
FeThRed_B
0.8454
Sybindin superfamily
0.8451
Nuc_sug_transp
0.8391
Leo1
0.8363
hypothetical protein
0.8331
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... cl00154 179.706 7.68E-58 8 - 160 specific 238117
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 179.706 7.68E-58 8 - 160 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28433 PHATRDRAFT_28433 230702 204395 Not available Cre12.g546650.t1.2 AT3G55380.1 354622
KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
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