31551 Aminotran_1_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31551 chr_1 Aminotran_1_2 1126023 1127228 - Aminotran_1_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7451543 Thaps31551.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0432

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0177
 0.33

Most Highly Correlated Transcripts

264628

UxaC
0.8564

5638

hypothetical protein
0.8535

1011

DSPc superfamily
0.8512

34191

CobN_like
0.8494

262575

DHOD_1A_like
0.8483

5659

hypothetical protein
0.8477

11594

DUF2042 superfamily
0.8443

8303

Glyco_trans_1_2
0.8431

bd392

(bd392) DEXDc
0.8429

3071

NA
0.8395

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 146.717 4.48E-40 29 - 379 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 146.717 4.48E-40 29 - 379 superfamily 267298
Aminotran_1_2 Aminotransferase class I and II; Aminotransferase class I and II. - 149.379 4.81E-41 29 - 377 multi-dom 249636

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51422 PHATRDRAFT_51422 203759 235801 Not available Cre06.g306400.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009058 GO:0016847 GO:0016769 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016847

1-aminocyclopropane-1-carboxylate synthase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H(+).
GO Category: 
MF

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

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