32154 (infC) IF3_C superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32154 chr_2 (infC) IF3_C superfamily 2119501 2120517 + IF3_C superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452509 Thaps32154.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0270

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0097
 0.39

Most Highly Correlated Transcripts

bd529

(bd529) SNF2_N
0.8955

bd1863

(bd1863) NA
0.8914

bd719

(bd719) NA
0.8593

bd890

(bd890) NA
0.8469

bd1820

(bd1820) Fasciclin
0.8464

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8407

bd1441

(bd1441) ccsA
0.8367

bd1342

(bd1342) psaL
0.8351

bd218

(bd218) Chloroa_b-bind superfamily
0.8294

bd624

(bd624) Glyco_transf_34 superfamily
0.8276

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IF3_C superfamily Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, C-... - 58.5886 3.26E-11 250 - 337 superfamily 250071
IF3_N superfamily Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, N-... - 57.4685 6.79E-11 187 - 232 superfamily 191228

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50629 PHATRDRAFT_50629 180128 160938 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003743 GO:0006413 -

GO:0003743

translation initiation factor activity

Details: 
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO Category: 
MF

GO:0006413

translational initiation

Details: 
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
GO Category: 
BP

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