34030 (MAO1) PLN03129
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34030 chr_5 (MAO1) PLN03129 366186 368144 - PLN03129

Synonyms

NCBI ID Ensembl Genomes exon ID
7449669 Thaps34030.2, Thaps34030.3, Thaps34030.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0225
 0.26

Most Highly Correlated Transcripts

bd718

(bd718) PRK10387
0.9454

bd1161

(bd1161) NA
0.935

bd1893

(bd1893) NA
0.9069

bd439

(bd439) POLBc_alpha
0.9061

bd463

(bd463) Aa_trans superfamily
0.9026

bd760

(bd760) ZnMc superfamily
0.9025

38608

SDR_a5
0.8954

bd1306

(bd1306) NA
0.893

bd1645

(bd1645) tpt
0.8921

34585

PLN02389
0.889

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1; Malic enzyme (ME), a member of the amino... cl17226 394.223 1.73E-133 304 - 587 specific 133454
NAD_bind_amino_acid_DH superfamily NAD(P) binding domain of amino acid dehydrogenase-like proteins; Amino acid dehydrogenase(DH)-like... - 394.223 1.73E-133 304 - 587 superfamily 266569
malic superfamily Malic enzyme, N-terminal domain; Malic enzyme, N-terminal domain. - 287.235 2.07E-93 114 - 294 superfamily 249824
malic superfamily Malic enzyme, N-terminal domain; Malic enzyme, N-terminal domain. - 287.235 2.07E-93 114 - 294 superfamily 249824
PLN03129 NADP-dependent malic enzyme; Provisional - 915.069 0 46 - 593 multi-dom 215594

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54082 PHATRDRAFT_54082 173311 298150 68285 Cre06.g268750.t1.2 AT4G00570.1 348119

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004470 GO:0006108 GO:0004471 -

GO:0004470

malic enzyme activity

Details: 
Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.
GO Category: 
MF

GO:0006108

malate metabolic process

Details: 
The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.
GO Category: 
BP

GO:0004471

malate dehydrogenase (decarboxylating) (NAD+) activity

Details: 
Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.
GO Category: 
MF

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