35771 PCI
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35771 chr_8 PCI 470929 472626 - PCI

Synonyms

NCBI ID Ensembl Genomes exon ID
7445579 Thaps35771.1, Thaps35771.2, Thaps35771.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0166

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0054
 0.44

Most Highly Correlated Transcripts

270222

0.985

16295

FBPase
0.8902

22871

hypothetical protein
0.89

8073

TauD
0.8793

23341

hypothetical protein
0.867

25944

p450 superfamily
0.865

261400

NA
0.8645

23973

BT1
0.8633

269624

TIM_phosphate_binding superfamily
0.8631

4022

hypothetical protein
0.8533

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PCI PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). cl02111 99.228 5.44E-25 353 - 454 specific 250589
PCI superfamily PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). - 99.228 5.44E-25 353 - 454 superfamily 261183
RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover,... - 95.7552 1.23E-21 237 - 454 multi-dom 227488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28818 PHATRDRAFT_28818 206245 248713 462889 Cre01.g030800.t1.2 AT2G26990.1 471545

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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