3580 ANK
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3580 chr_3 ANK 1295592 1297870 - ANK

Synonyms

NCBI ID Ensembl Genomes exon ID
7441911 Thaps3580.2, Thaps3580.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0254
 0.29

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9535

17262

(OGG) ogg
0.9121

bd1221

(bd1221) recQ_fam
0.8952

3858

PTZ00141
0.8895

23667

hypothetical protein
0.8838

22302

Peptidase_C19 superfamily
0.8815

263872

PRK14329
0.88

31690

SpoVK
0.8796

268010

(RPC2) PRK08565
0.8767

22840

hypothetical protein
0.8741

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 113.633 2.43E-29 531 - 667 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 113.633 2.43E-29 531 - 667 superfamily 238125
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 64.9699 1.25E-12 459 - 597 multi-dom 257303
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 64.9699 1.25E-12 459 - 597 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37533 PHATRDRAFT_37533 253438 213715 Not available Not available Not available 309222

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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