36456 eIF-5_eIF-2B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36456 chr_10 eIF-5_eIF-2B superfamily 1059416 1060138 + eIF-5_eIF-2B superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450782 Thaps36456.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0011

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0066
 0.42

Most Highly Correlated Transcripts

262977

NA
0.9148

31751

PKCI_related
0.9021

22547

hypothetical protein
0.9019

21600

Armet superfamily
0.8858

23278

GrpE
0.8852

261499

MttA_Hcf106 superfamily
0.8805

41655

Chloroa_b-bind
0.8793

39841

ArsA_ATPase
0.8786

13393

PLN02321
0.8773

16193

S49_Sppa_N_C
0.8768

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
eIF-5_eIF-2B superfamily Domain found in IF2B/IF5; This family includes the N terminus of eIF-5, and the C terminus of eIF-2... - 143.233 7.28E-43 96 - 216 superfamily 266499

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd358 PHATRDRAFT_bd358 270735 246866 355533 Cre12.g531550.t1.2 AT5G20920.2 259181

KEGG

KEGG description KEGG Pathway
RNA transport map03013

GO Terms

GO:0003743 GO:0006413 -

GO:0003743

translation initiation factor activity

Details: 
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO Category: 
MF

GO:0006413

translational initiation

Details: 
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
GO Category: 
BP

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