37795 GINS_A_psf1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37795 chr_16a GINS_A_psf1 350718 351342 - GINS_A_psf1

Synonyms

NCBI ID Ensembl Genomes exon ID
7442535 Thaps37795.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0191

Most Highly Correlated Transcripts

40148

(UBC2) UBCc
0.8882

38331

YIP1 superfamily
0.8865

35314

GSH_Peroxidase
0.8862

2312

hypothetical protein
0.8795

34702

Sybindin superfamily
0.8791

37116

Nuc_sug_transp
0.8773

262215

YEATS
0.877

6686

hypothetical protein
0.8753

bd718

(bd718) PRK10387
0.8752

7707

hypothetical protein
0.8744

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GINS_A_psf1 Alpha-helical domain of GINS complex protein Psf1; Psf1 is a component of the GINS tetrameric... cl17012 144.32 1.19E-43 4 - 141 specific 212548
GINS_A superfamily Alpha-helical domain of GINS complex proteins; Sld5, Psf1, Psf2 and Psf3; The GINS complex is... - 144.32 1.19E-43 4 - 141 superfamily 266497

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35504 PHATRDRAFT_35504 256520 256680 461169 Cre03.g161050.t1.2 Not available 554712

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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