37928 PLN03238
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37928 chr_17 PLN03238 544377 545633 + PLN03238

Synonyms

NCBI ID Ensembl Genomes exon ID
7453083 Thaps37928.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0326

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0184
 0.33

Most Highly Correlated Transcripts

268136

COG1054
0.9058

26022

Pam16 superfamily
0.9041

13308

PLN02948
0.9039

264498

PRK00142
0.9023

23812

TrmA
0.901

268443

SAICAR_synt_Sc
0.8995

21698

hypothetical protein
0.897

267979

HCO3_cotransp superfamily
0.8967

4372

hypothetical protein
0.896

264548

FusA
0.8934

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN03238 probable histone acetyltransferase MYST; Provisional cl19766 530.581 0 147 - 418 specific 215642
MOZ_SAS superfamily MOZ/SAS family; This region of these proteins has been suggested to be homologous to... - 530.581 0 147 - 418 superfamily 268119

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51406 PHATRDRAFT_51406 173464 187679 349715 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0005634 GO:0008270 GO:0004402 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0004402

histone acetyltransferase activity

Details: 
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
GO Category: 
MF

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