40958 (TPI1) TIM
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40958 chr_6 (TPI1) TIM 556291 557463 + TIM

Synonyms

NCBI ID Ensembl Genomes exon ID
7448577 Thaps40958.1, Thaps40958.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0316

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0135
 0.41

Most Highly Correlated Transcripts

21149

hypothetical protein
0.793

28544

PLN02775
0.7671

10096

hypothetical protein
0.7371

1310

DadA
0.7343

24722

hypothetical protein
0.733

9329

hypothetical protein
0.7267

17811

NA
0.7234

37197

Pumilio superfamily
0.7189

9636

hypothetical protein
0.7188

15007

Pumilio superfamily
0.7187

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of... cl17186 299.451 1.37E-101 31 - 276 specific 238190
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 299.451 1.37E-101 31 - 276 superfamily 266538

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50738 PHATRDRAFT_50738 269372 211159 74095 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004807 GO:0008152 -

GO:0004807

triose-phosphate isomerase activity

Details: 
Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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