412 (ALAT_1) PTZ00377
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
412 chr_4 (ALAT_1) PTZ00377 1688810 1690523 - PTZ00377

Synonyms

NCBI ID Ensembl Genomes exon ID
7443733 Thaps412.5, Thaps412.1, Thaps412.4, Thaps412.2, Thaps412.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0159
 0.26

Most Highly Correlated Transcripts

bd760

(bd760) ZnMc superfamily
0.9754

32201

Cob-chelat-sub
0.9339

bd463

(bd463) Aa_trans superfamily
0.9259

40747

Chloroa_b-bind
0.9225

29375

Chloroa_b-bind
0.9218

38122

Chloroa_b-bind superfamily
0.9209

269147

NAD_binding_8 superfamily
0.9188

bd1809

(bd1809) ZnMc_pappalysin_like
0.9183

39813

Chloroa_b-bind superfamily
0.9172

bd897

(bd897) NA
0.9153

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 164.051 5.06E-46 67 - 434 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 164.051 5.06E-46 67 - 434 superfamily 267298
PTZ00377 alanine aminotransferase; Provisional - 613.896 0 2 - 444 multi-dom 240391

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd475 PHATRDRAFT_bd475 223701 196878 447795 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0009058 GO:0016847 GO:0016769 GO:0004021 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016847

1-aminocyclopropane-1-carboxylate synthase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H(+).
GO Category: 
MF

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0004021

L-alanine:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.
GO Category: 
MF

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