4382 DUF2854 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4382	chr_4	DUF2854 superfamily	887251	888313	-	DUF2854 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447918	Thaps4382.2, Thaps4382.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0014

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0203	0.30	0.00019 0.029

Most Highly Correlated Transcripts

11086 hypothetical protein 0.9	38608 SDR_a5 0.8974	261608 PLN02585 0.8956	38306 Chloroa_b-bind 0.8875	36235 p450 superfamily 0.8808	261284 Aldo_ket_red 0.8775
7740 hypothetical protein 0.8706	574 PRK05444 0.8703	261275 ThylakoidFormat superfamily 0.8698	4379 RAP 0.8668

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2854 superfamily		Protein of unknown function (DUF2854); This family of proteins has no known function.	-	129.37	8.39E-37	110 - 247	superfamily	192697

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48524	PHATRDRAFT_48524	162891	311006	Not available	Cre16.g665250.t1.2	AT5G38660.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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