5221 COG1233
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
5221 chr_5 COG1233 650570 652675 - COG1233
NCBI ID Ensembl Genomes exon ID
7446407 Thaps5221.1, Thaps5221.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0147
Normalized Mean Residue
Thaps_bicluster_0021
0.47
(DGT) PLN03242
0.8907
hypothetical protein
0.8706
Telomere_reg-2 superfamily
0.8674
sec14-like cytosolic factor
0.8622
(APA1) Adaptin_N
0.8571
NAD_binding_8 superfamily
0.8542
COG3899
0.8474
VacB
0.8473
hypothetical protein
0.8462
PIPKc superfamily
0.8462
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 115.29 1.95E-27 50 - 649 superfamily 267487
COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and... - 144.114 3.46E-37 50 - 649 multi-dom 224154
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54826 PHATRDRAFT_54826 227318 214681 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0016117 GO:0016705 GO:0050660 -

carotenoid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
GO Category: 
BP

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
GO Category: 
MF

flavin adenine dinucleotide binding

Details: 
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO Category: 
MF
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