5579 Hydrolase_4 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5579 chr_5 Hydrolase_4 superfamily 1560697 1561900 - Hydrolase_4 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448160 Thaps5579.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0286

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

3890

COG0398
0.9013

267979

HCO3_cotransp superfamily
0.9005

3690

AdoMet_MTases
0.8981

268443

SAICAR_synt_Sc
0.8981

23835

hypothetical protein
0.8944

2622

hypothetical protein
0.8939

24969

hypothetical protein
0.8937

36007

Aldolase_II superfamily
0.8819

2332

PTZ00340
0.8796

12899

AAA
0.8787

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Hydrolase_4 superfamily Putative lysophospholipase; This domain is found in bacteria and eukaryotes and is approximately... - 133.317 4.55E-36 109 - 399 superfamily 267493
MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function... - 106.636 1.72E-26 111 - 400 multi-dom 223669

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21912 PHATRDRAFT_21912 273870 294459 225886 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0006725 GO:0016787 GO:0004518 GO:0016788 GO:0042578 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0006725

cellular aromatic compound metabolic process

Details: 
The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO Category: 
BP

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0004518

nuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO Category: 
MF

GO:0016788

hydrolase activity, acting on ester bonds

Details: 
Catalysis of the hydrolysis of any ester bond.
GO Category: 
MF

GO:0042578

phosphoric ester hydrolase activity

Details: 
Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
GO Category: 
MF

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