7019 mTERF superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7019	chr_7	mTERF superfamily	1058357	1059761	-	mTERF superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444145	Thaps7019.2, Thaps7019.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0326

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0100	0.39	4.5 0.21

Most Highly Correlated Transcripts

5241 RNase_P_p30 superfamily 0.8339	23872 GLTP superfamily 0.8232	20737 Sun 0.8202	11367 GH_J 0.8031	26553 ABC_MTABC3_MDL1_MDL2 0.7962	36650 hypothetical protein 0.7947
4712 Enkurin 0.7945	21802 hypothetical protein 0.7941	262707 Cupin_8 superfamily 0.7914	263650 NAD_binding_8 superfamily 0.7899

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
mTERF superfamily		mTERF; This family contains one sequence of known function Human mitochondrial transcription...	-	89.7683	1.11E-19	88 - 432	superfamily	268118

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	AT4G38160.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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