7141 DEP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7141 chr_7 DEP 1384944 1387343 + DEP

Synonyms

NCBI ID Ensembl Genomes exon ID
7447125 Thaps7141.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0367

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0042
 0.43

Most Highly Correlated Transcripts

270222

0.9538

16295

FBPase
0.8786

268908

Trans_IPPS_HH
0.8727

264556

FBPase
0.8719

4160

PMT_2 superfamily
0.8703

269320

(DGD2) UGD_SDR_e
0.8695

261400

NA
0.8663

22248

PLN00162
0.8557

21941

hypothetical protein
0.8525

15464

PCI
0.8507

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEP DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered... cl02442 72.3733 3.32E-15 697 - 778 specific 239836
DEP superfamily DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered... - 72.3733 3.32E-15 697 - 778 superfamily 261288
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 72.3676 4.27E-14 257 - 571 superfamily 238121

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40431 PHATRDRAFT_40431 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007242 -

GO:0007242

NA

Details: 
NA
GO Category: 
NA

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