7902 cwf18 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7902 chr_9 cwf18 superfamily 219223 219739 - cwf18 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443488 Thaps7902.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0427

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0003
 0.47

Most Highly Correlated Transcripts

6704

hypothetical protein
0.8182

bd804

(bd804) alpha-crystallin-Hsps_p23-like superfamily
0.8173

bd388

(bd388) COG3899
0.7944

bd933

(bd933) NA
0.7773

36524

Elf1
0.7597

263031

(Rad23) rad23
0.7515

9404

hypothetical protein
0.7486

bd648

(bd648) NA
0.7473

36206

Rer1
0.7435

19374

RRM_NCBP2
0.734

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cwf18 superfamily cwf18 pre-mRNA splicing factor; The cwf18 family is involved in mRNA splicing. It has been isolated... - 76.1533 4.00E-18 2 - 145 superfamily 254723

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44784 PHATRDRAFT_44784 258449 235230 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

Not available -

Add comment

Log in to post comments