9966 Methyltransf_21Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9966	chr_14	Methyltransf_21	860570	861583	+	Methyltransf_21

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451582	Thaps9966.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0249

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0035	0.44

Most Highly Correlated Transcripts

25162 hypothetical protein 0.8547	6592 TroA-like superfamily 0.8506	12836 EEP superfamily 0.8453	38991 COG1565 0.843	bd654 (bd654) Sec1 superfamily 0.8425	34590 nt_trans superfamily 0.8409
6950 prc 0.8374	260861 AAA 0.8286	24639 EH 0.8247	bd392 (bd392) DEXDc 0.8242

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_21		Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a...	cl17387	71.5676	3.63E-15	167 - 329	specific	252973
Methyltransf_21 superfamily		Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a...	-	71.5676	3.63E-15	167 - 329	superfamily	266660

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	150467	230259	214166	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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