ThpsCp055 (ycf12) Ycf12Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCp055	chloroplast	(ycf12) Ycf12	54625	54853	+	Ycf12

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524835	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0069

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0094	0.37	39 0.05

Most Highly Correlated Transcripts

ThpsCp048 (petN) cytochrome b6/f complex subunit VIII 0.9403	ThpsCp051 (psbK) photosystem II protein K 0.9386	33606 Chloroa_b-bind superfamily 0.936	40747 Chloroa_b-bind 0.9353	262332 Chloroa_b-bind superfamily 0.9323	39813 Chloroa_b-bind superfamily 0.9284
38715 PLN00120 0.9279	32723 Chloroa_b-bind 0.9246	38122 Chloroa_b-bind superfamily 0.9236	34276 Chloroa_b-bind 0.9229

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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