ThpsCt003 (trnV(uac)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt003	chloroplast	(trnV(uac))	19666	19737	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524850	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0038	0.59	0.00078 5.2

Most Highly Correlated Transcripts

ThpsCt004 (trnR(ucu)) 0.943	bd1313 (bd1313) psbH 0.8751	bd1720 (bd1720) ftsH 0.8747	bd2073 (bd2073) psbB 0.8722	bd1563 (bd1563) atpB 0.8665	bd1304 (bd1304) Ycf4 0.8455
ThpsCt010 (trnD(guc)) 0.8447	bd1380 (bd1380) ycf39 0.8432	bd1319 (bd1319) ycf16 0.8424	bd573 (bd573) petA 0.8417

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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