261750 GckA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261750 chr_3 GckA 792106 794150 - GckA

Synonyms

NCBI ID Ensembl Genomes exon ID
7448707 Thaps261750.3, Thaps261750.1, Thaps261750.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0226

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0279
 0.39

Most Highly Correlated Transcripts

4372

hypothetical protein
0.8902

270365

hypothetical protein
0.8881

262625

gatB
0.8744

7558

DUF525 superfamily
0.8538

bd1945

(bd1945) NA
0.8462

263424

PLN02551
0.8421

3007

hypothetical protein
0.8305

22139

Cyt_C5_DNA_methylase superfamily
0.8305

bd1876

(bd1876) NatB_MDM20 superfamily
0.8303

11220

eIF2A
0.8302

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF4147 superfamily Domain of unknown function (DUF4147); This domain is frequently found at the N-terminus of proteins... - 260.855 2.89E-82 161 - 424 superfamily 257967
DUF4147 superfamily Domain of unknown function (DUF4147); This domain is frequently found at the N-terminus of proteins... - 260.855 2.89E-82 161 - 424 superfamily 257967
MOFRL superfamily MOFRL family; MOFRL(multi-organism fragment with rich Leucine) family exists in bacteria and... - 112.37 2.75E-29 508 - 623 superfamily 253053
GckA Putative glycerate kinase [Carbohydrate transport and metabolism] - 334.285 8.86E-108 159 - 629 multi-dom 225254

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48153 PHATRDRAFT_48153 241735 225168 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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