7558 DUF525 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7558	chr_8	DUF525 superfamily	540552	542231	-	DUF525 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445593	Thaps7558.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0279	0.39	0.0000044 0.31

Most Highly Correlated Transcripts

23232 hypothetical protein 0.9027	4372 hypothetical protein 0.8854	26492 PRK05385 0.8803	22139 Cyt_C5_DNA_methylase superfamily 0.8702	8157 hypothetical protein 0.8695	21291 hypothetical protein 0.8627
32140 DHDPS 0.8616	29232 PLN02502 0.8599	262625 gatB 0.8583	1366 Abi 0.858

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF525 superfamily		Protein of unknown function (DUF525); Members of this family include the bacterial protein ApaG and...	-	71.7166	6.74E-15	383 - 552	superfamily	242313

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48196	PHATRDRAFT_48196	Not available	284948	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005509 -

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