264690 (lipB_1) BPL_LplA_LipB superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
264690 chr_20 (lipB_1) BPL_LplA_LipB superfamily 303449 306914 + BPL_LplA_LipB superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0324
Normalized Mean Residue
Thaps_bicluster_0026
0.39
(bd977) rps14
0.8066
(bd1396) rpl19
0.7718
(bd1676) RPS2
0.771
(bd1447) rps6
0.7549
PLN02948
0.6954
hypothetical protein
0.688
hypothetical protein
0.6854
HslU
0.6813
COG0116
0.6779
hypothetical protein
0.677
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CYCLIN Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... cl00050 60.7152 2.66E-11 80 - 168 specific 238003
CYCLIN superfamily Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control.... - 60.7152 2.66E-11 80 - 168 superfamily 260157
BPL_LplA_LipB superfamily Biotin/lipoate A/B protein ligase family; This family includes biotin protein ligase, lipoate-... - 208.279 3.29E-62 434 - 679 superfamily 265422
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51454 PHATRDRAFT_51454 162725 233862 55751 Cre16.g675250.t1.1 AT1G47578.1 284246
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0009107 GO:0003824 GO:0006464 GO:0000074 GO:0005634 -

lipoate biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.
GO Category: 
BP

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC
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