264811 DUF389Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264811	chr_22	DUF389	489740	490915	+	DUF389

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442838	Thaps264811.2, Thaps264811.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0006

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0283	0.35	15 620

Most Highly Correlated Transcripts

16075 tpt 0.9062	36037 Trypsin_2 0.8953	26991 GRX_GRXh_1_2_like 0.8728	261184 ACD_sHsps-like 0.8679	38608 SDR_a5 0.8663	31785 not_thiJ 0.8657
17214 PLN02512 0.8637	261882 Thioredoxin_like superfamily 0.8631	30659 GloB 0.8611	37934 GRX_PICOT_like 0.8576

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF389		Domain of unknown function (DUF389); Family of hypothetical bacterial proteins with an undetermined...	cl00781	93.3059	2.93E-23	132 - 293	specific	252362
DUF389 superfamily		Domain of unknown function (DUF389); Family of hypothetical bacterial proteins with an undetermined...	-	93.3059	2.93E-23	132 - 293	superfamily	260618

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_29666	PHATRDRAFT_29666	206082	244221	461978	Cre09.g395200.t1.1	Not available	310835

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments