27273 MTHFR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27273 chr_2 MTHFR 2269885 2271345 - MTHFR

Synonyms

NCBI ID Ensembl Genomes exon ID
7450447 Thaps27273.1, Thaps27273.3, Thaps27273.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0368

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0038
 0.59

Most Highly Correlated Transcripts

28496

(AHC3) PRK05476
0.8106

644

(AK2) PTZ00247
0.8045

261608

PLN02585
0.7654

28125

PLN00203
0.764

33663

PLN02649
0.757

5954

PRK05476
0.7553

575

PRK00062
0.7497

262279

PT_UbiA_chlorophyll
0.7456

36235

p450 superfamily
0.744

32201

Cob-chelat-sub
0.7396

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MTHFR Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-... cl00246 295.294 6.49E-98 26 - 313 specific 238299
MTHFR superfamily Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-... - 295.294 6.49E-98 26 - 313 superfamily 260296

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_30471 PHATRDRAFT_30471 225004 297821 437840 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004489 GO:0006555 -

GO:0004489

methylenetetrahydrofolate reductase (NAD(P)H) activity

Details: 
Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+.
GO Category: 
MF

GO:0006555

methionine metabolic process

Details: 
The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
GO Category: 
BP

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