32899 HlyIII superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32899 chr_3 HlyIII superfamily 1133848 1135387 - HlyIII superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451683 Thaps32899.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0152
 0.38

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9479

bd1941

(bd1941) NA
0.9143

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9141

bd1841

(bd1841) CAP10 superfamily
0.9125

18841

RRM_RBM8
0.9042

42646

PRK04342
0.9023

268652

ATG11 superfamily
0.8983

1186

hypothetical protein
0.895

21421

hypothetical protein
0.89

240

AAT_I superfamily
0.8897

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HlyIII superfamily Haemolysin-III related; Members of this family are integral membrane proteins. This family includes... - 172.119 3.96E-50 306 - 508 superfamily 261909

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45839 PHATRDRAFT_45839 274607 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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