36206 Rer1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36206 chr_9 Rer1 151270 152064 + Rer1

Synonyms

NCBI ID Ensembl Genomes exon ID
7444995 Thaps36206.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0426

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0003
 0.47

Most Highly Correlated Transcripts

262700

Dpy-30 superfamily
0.798

32098

PTZ00063
0.784

260936

HCO3_cotransp superfamily
0.7802

36438

SSB_OBF
0.7674

4948

hypothetical protein
0.7611

8509

hypothetical protein
0.7569

34855

Abhydrolase_5
0.7538

263610

COG3899
0.7524

263031

(Rad23) rad23
0.7508

7902

cwf18 superfamily
0.7435

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rer1 Rer1 family; RER1 family protein are involved in involved in the retrieval of some endoplasmic... cl02175 242.896 1.24E-80 64 - 218 specific 202582
Rer1 superfamily Rer1 family; RER1 family protein are involved in involved in the retrieval of some endoplasmic... - 242.896 1.24E-80 64 - 218 superfamily 242921

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11248 PHATRDRAFT_11248 267689 187565 70641 Cre12.g555350.t1.2 AT2G21600.1 518489

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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