6416 nt_trans superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6416	chr_6	nt_trans superfamily	1522092	1523618	+	nt_trans superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442752	Thaps6416.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0440

Most Highly Correlated Transcripts

bd392 (bd392) DEXDc 0.9355	30701 PRK05279 0.9161	25040 NA 0.9116	bd624 (bd624) Glyco_transf_34 superfamily 0.9029	bd1949 (bd1949) NA 0.9023	35136 NA 0.9017
23205 hypothetical protein 0.9016	269097 TAF12 0.9005	13393 PLN02321 0.9002	bd446 (bd446) HrpA 0.8974

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
nt_trans superfamily		nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes...	-	106.98	2.18E-27	352 - 505	superfamily	260139

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48302	PHATRDRAFT_48302	253243	153237	Not available	Not available	AT2G18250.1	320933

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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