Thaps_hclust_0429 Hierarchical Clustering
Thalassiosira pseudonana

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0000105 histidine biosynthesis 0.000156702 0.565537 Thaps_hclust_0429
GO:0051090 regulation of transcription factor activity 0.00248088 1 Thaps_hclust_0429
GO:0005975 carbohydrate metabolic process 0.0123481 1 Thaps_hclust_0429
GO:0015780 nucleotide-sugar transport 0.0123481 1 Thaps_hclust_0429
GO:0006289 nucleotide-excision repair 0.0123481 1 Thaps_hclust_0429
GO:0008643 carbohydrate transport 0.034223 1 Thaps_hclust_0429
GO:0006397 mRNA processing 0.0532936 1 Thaps_hclust_0429
GO:0015031 protein transport 0.101723 1 Thaps_hclust_0429
GO:0006464 protein modification 0.137086 1 Thaps_hclust_0429
GO:0006118 electron transport 0.493154 1 Thaps_hclust_0429

Members

1880 : hypothetical protein
10189 : hypothetical protein
22596 : PLN02296
25182 : hypothetical protein
3021 : TAF6
10558 : HAD-SF-IIA-hyp4
23050 : hypothetical protein
34293 : (Tp_CCCH3) RRM_SF superfamily
3098 : MCT1_N
10559 : HisA_HisF
23791 : hypothetical protein
34672 : Sm_E
6483 : hypothetical protein
10788 : Methyltransf_21
23806 : Nuc_sug_transp
40627 : MPP_PP2A_PP4_PP6
9203 : hypothetical protein
20945 : Tim17
24888 : hypothetical protein
263031 : (Rad23) rad23
10025 : WD40 superfamily
21599 : NDUFA12 superfamily
25141 : hypothetical protein
269935 : hisD

Conditions

Condition Condition Difference FDR
diel_light_vs_dark diel_light_vs_dark 0.231 0.235
lowFe_KTKB_Day3 lowFe_KTKB_Day3 -0.060 0.81
lowFe_KTKB_Day5 lowFe_KTKB_Day5 0.217 0.246
BaP BaP 0.067 0.773
exponential_vs_stationary_24highlight exponential_vs_stationary_24highlight -0.008 0.961
co2_elevated_stat_arrays co2_elevated_stat_arrays -0.108 0.694
lowtemp_TMEVA lowtemp_TMEVA -0.039 0.898
highpH_TMEVA highpH_TMEVA -0.064 0.722
co2_elevated_expo_arrays co2_elevated_expo_arrays 0.144 0.43
lowFe_TMEVA lowFe_TMEVA 0.054 0.888
exponential_vs_stationary_24light exponential_vs_stationary_24light 0.165 0.631
lowN_TMEVA lowN_TMEVA -0.294 0.36
diel_exponential_vs_stationary diel_exponential_vs_stationary 0.132 0.469
lowSi_TMEVA lowSi_TMEVA -0.335 0.599
highlight_arrays highlight_arrays -0.056 0.745

Motifs

MEME Output