12089 DUF1995 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
12089	chr_23	DUF1995 superfamily	349832	351136	-	DUF1995 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442675	Thaps12089.2, Thaps12089.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0010

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0148	0.34	0.028 0.13

Most Highly Correlated Transcripts

28125 PLN00203 0.9485	270222 0.9432	268908 Trans_IPPS_HH 0.9098	263658 GUN4 0.8912	5415 Thioredoxin_like superfamily 0.8897	25601 hypothetical protein 0.8874
4331 Aldolase_Class_I superfamily 0.8793	36669 TPT 0.878	8073 TauD 0.876	268592 VDE superfamily 0.8752

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1995 superfamily		Domain of unknown function (DUF1995); This family of proteins are functionally uncharacterized.	-	69.233	5.74E-14	275 - 380	superfamily	255309

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_39048	PHATRDRAFT_39048	215531	297528	Not available	Not available	AT5G48790.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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