7372 Tryp_SPcThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7372	chr_8	Tryp_SPc	81753	83981	+	Tryp_SPc

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443440	Thaps7372.5, Thaps7372.4, Thaps7372.2, Thaps7372.1, Thaps7372.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0334

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0065	0.48	0.0000029 0.0000057

Most Highly Correlated Transcripts

5869 hypothetical protein 0.844	24685 Glyco_tranf_GTA_type superfamily 0.8378	21576 hypothetical protein 0.8356	bd877 (bd877) NA 0.8331	23754 hypothetical protein 0.8281	21580 RNB 0.8272
4047 hypothetical protein 0.8254	10078 hypothetical protein 0.825	25198 HA 0.8238	261181 Gly_transf_sug superfamily 0.8223

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Tryp_SPc superfamily		Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are...	-	240.641	9.06E-75	186 - 419	superfamily	238113
Tryp_SPc superfamily		Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are...	-	240.641	9.06E-75	186 - 419	superfamily	238113
Tryp_SPc		Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are...	-	240.658	9.44E-75	185 - 416	multi-dom	214473

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	186696	327804	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004295 GO:0006508 GO:0004263 GO:0004284 -

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